The 688RS is a very small sealed bearing, which is designed for radial loads. Unfortunately, small sealed bearings will not last very long if they see any type of lateral loads. I believe the new Enduro bearings that you are referring to are called full compliment sealed bearing, which has more small loose ball bearings packed in-between the inner and outer races than a standard seal bearings with ball bearing retainers/cages. The 40% stronger estimate for the Enduro bearing is probably on the high side of reality, however packing the new bearings with Phil Woods or Boat grease is a good idea but it won’t solve the root problem of your bearing failure-lateral loads. I have owned two Stumpjumper FSR frames that suffered from chronic bearing failures. The first frame was a 2004 SJ FSR that would destroy its (4) drop-out 688s and its (4) shock link 6800 every few months. My 2007 SJ was even worse all of its (10) 6800 and 6801 full compliment sealed bearings would wear-out within five 20 mile rides. My LBS changed out the 2007 FSR’s rear end seat and chain stay swing arm with the same results. Luckily Specialized warranty out the frame for a 2009 Epic, which has had zero bearing problems for well over two years. The Epic, in my opinion, is the best FS bike Specialized has designed and built to date.
Changing out the 688 yourself will void the frame warrantee. Only an Authorized Specialized dearer can change out your bearings with Specialized packaged bearings will keep your warrantee in tack. Try that route first and if the 688 keeps failing, push to warrantee out the frame becausw something is out of alignment.